STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ92625.1Outer membrane efflux protein. (933 aa)    
Predicted Functional Partners:
APZ92626.1
Multidrug resistance protein.
 
   0.736
APZ93583.1
Putative efflux pump membrane fusion protein.
  
   0.684
APZ93514.1
Type I secretion outer membrane protein, TolC family.
  
     0.662
APZ92627.1
Putative efflux pump membrane fusion protein.
 
   0.648
APZ95070.1
Hypothetical protein.
  
     0.617
APZ94421.1
Efflux transporter, RND family, MFP subunit.
  
   0.615
APZ94422.1
Efflux transporter, RND family, MFP subunit.
 
   0.597
APZ92424.1
Beta-propeller repeat.
  
    0.565
APZ92393.1
Efflux transporter, RND family, MFP subunit.
 
   0.558
APZ91197.1
Putative lipase.
  
     0.542
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.