STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ92932.1Planctomycete cytochrome C. (917 aa)    
Predicted Functional Partners:
ctaD
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.893
APZ92931.1
Hypothetical protein.
 
     0.893
ctaC
Cytochrome c oxidase subunit 2 precursor.
  
 
 0.860
APZ92929.1
Hypothetical protein.
 
     0.853
APZ94782.1
Hypothetical protein.
 
     0.789
APZ91102.1
Hypothetical protein.
  
     0.774
APZ91532.1
Hypothetical protein.
  
     0.774
APZ91718.1
Hypothetical protein.
  
     0.774
APZ92049.1
Hypothetical protein.
  
     0.774
APZ92518.1
Hypothetical protein.
  
     0.774
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.