STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yydHPutative peptide zinc metalloprotease protein YydH. (718 aa)    
Predicted Functional Partners:
APZ93066.1
Efflux transporter, RND family, MFP subunit.
 
     0.866
APZ92626.1
Multidrug resistance protein.
  
     0.774
APZ95122.1
Efflux transporter, RND family, MFP subunit.
 
     0.771
APZ94421.1
Efflux transporter, RND family, MFP subunit.
  
     0.769
APZ92392.1
Efflux transporter, RND family, MFP subunit.
  
     0.753
fliG
Flagellar motor switch protein FliG.
  
  
 0.701
fliM
Flagellar motor switch protein FliM.
  
  
 0.684
flhA
Flagellar biosynthesis protein FlhA.
  
  
 0.675
cya_1
Cyclolysin.
  
     0.643
APZ93065.1
Multidrug resistance protein.
 
     0.634
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.