STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ93298.1Type III secretion system chaperone protein SscB. (479 aa)    
Predicted Functional Partners:
APZ96748.1
PQQ-dependent catabolism-associated beta-propeller protein.
   
 0.678
APZ93299.1
Hypothetical protein.
       0.639
APZ93300.1
Phosphoglycolate phosphatase.
       0.639
APZ93301.1
Nif11 domain/cupin domain protein.
       0.559
maa_1
Maltose O-acetyltransferase.
       0.559
APZ93304.1
Putative lipase.
  
    0.512
APZ93303.1
Hypothetical protein.
       0.511
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.