STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xynZEndo-1,4-beta-xylanase Z precursor. (1885 aa)    
Predicted Functional Partners:
gfo_5
Glucose--fructose oxidoreductase precursor.
 
     0.846
APZ93379.1
Endo-1,4-beta-xylanase/feruloyl esterase precursor.
 
    
0.737
APZ95912.1
GDSL-like Lipase/Acylhydrolase.
  
     0.684
APZ94633.1
Putative membrane-bound dehydrogenase domain protein.
  
     0.683
APZ96704.1
Stress responsive A/B Barrel Domain protein.
  
     0.678
APZ95338.1
Hypothetical protein; NIPSNAP.
  
     0.646
APZ92336.1
Trehalose utilization.
  
     0.636
gfo_2
Glucose--fructose oxidoreductase precursor.
  
     0.627
iolI_2
Inosose isomerase.
  
     0.610
xynA
Endo-1,4-beta-xylanase A precursor.
    
0.604
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.