STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhFFormate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (735 aa)    
Predicted Functional Partners:
dmsB
DMSO reductase iron-sulfur subunit.
 
 
 0.963
ttrB
Tetrathionate reductase electron transport protein.
  
 
 0.926
APZ93885.1
Nitrate reductase cytochrome c-type subunit (NapB).
  
 
 0.915
APZ93879.1
Putative hydrogenase 2 b cytochrome subunit.
  
 
 0.904
tufA
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.842
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein B.
     
 0.796
nrfH
Cytochrome c-type protein NrfH.
  
 
 0.742
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.717
moaA_1
Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
 0.698
gltB_2
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.656
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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