Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APZ93503.1 | APZ93505.1 | Fuma_03121 | Fuma_03123 | Putative peptidase. | Hypothetical protein. | 0.460 |
APZ93503.1 | apt | Fuma_03121 | Fuma_03122 | Putative peptidase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.461 |
APZ93503.1 | pepQ | Fuma_03121 | Fuma_04287 | Putative peptidase. | Xaa-Pro dipeptidase. | 0.725 |
APZ93503.1 | prsA | Fuma_03121 | Fuma_03120 | Putative peptidase. | Foldase protein PrsA 2 precursor. | 0.576 |
APZ93503.1 | valS | Fuma_03121 | Fuma_03356 | Putative peptidase. | Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.407 |
APZ93505.1 | APZ93503.1 | Fuma_03123 | Fuma_03121 | Hypothetical protein. | Putative peptidase. | 0.460 |
APZ93505.1 | apt | Fuma_03123 | Fuma_03122 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.773 |
apt | APZ93503.1 | Fuma_03122 | Fuma_03121 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Putative peptidase. | 0.461 |
apt | APZ93505.1 | Fuma_03122 | Fuma_03123 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein. | 0.773 |
pepQ | APZ93503.1 | Fuma_04287 | Fuma_03121 | Xaa-Pro dipeptidase. | Putative peptidase. | 0.725 |
prsA | APZ93503.1 | Fuma_03120 | Fuma_03121 | Foldase protein PrsA 2 precursor. | Putative peptidase. | 0.576 |
valS | APZ93503.1 | Fuma_03356 | Fuma_03121 | Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | Putative peptidase. | 0.407 |