STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhTAlcohol dehydrogenase. (333 aa)    
Predicted Functional Partners:
qorA
Quinone oxidoreductase 1.
  
     0.670
tdh_1
L-threonine 3-dehydrogenase.
 
  
 0.646
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.535
yjjN
Putative L-galactonate oxidoreductase.
 
   
 0.517
dkgA
2,5-diketo-D-gluconic acid reductase A.
 
  
 0.489
fadJ
Fatty acid oxidation complex subunit alpha.
 
 
 0.485
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
   
 0.456
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.442
hemY_2
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
    0.435
tdh_2
L-threonine 3-dehydrogenase.
 
   
 0.431
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.