STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ93813.1Septum site-determining protein MinD. (401 aa)    
Predicted Functional Partners:
APZ93811.1
Flp pilus assembly protein CpaB.
 
  
 0.958
outD_1
Pectic enzymes secretion protein OutD; Belongs to the bacterial secretin family.
 
  
 0.944
APZ91089.1
Flp pilus assembly protein.
 
  
 0.931
APZ95399.1
Flp pilus assembly protein.
 
  
 0.931
APZ91090.1
Flp pilus assembly protein.
 
  
 0.914
APZ95400.1
Flp pilus assembly protein.
 
  
 0.914
outO
Pectic enzymes secretion protein OutO.
 
  
 0.859
APZ91088.1
Putative conjugal transfer protein.
 
  
 0.858
APZ95398.1
Putative conjugal transfer protein.
 
  
 0.857
APZ95492.1
Flp pilus assembly protein.
 
    0.830
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.