STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ94696.1Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. (506 aa)    
Predicted Functional Partners:
zraR_12
Transcriptional regulatory protein ZraR.
       0.761
barA_6
Signal transduction histidine-protein kinase BarA.
  
    0.759
glnG_6
Nitrogen regulation protein NR(I).
       0.699
APZ94700.1
Putative hydrolase.
 
     0.666
APZ94697.1
Serine endoprotease.
  
  
 0.635
glnG_5
Nitrogen regulation protein NR(I).
       0.618
APZ94698.1
Squalene/oxidosqualene cyclase.
       0.605
APZ94699.1
Hypothetical protein.
       0.597
APZ94691.1
ABC transporter ATP-binding/permease protein.
       0.464
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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