STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ95069.1Bacterial regulatory proteins, tetR family. (197 aa)    
Predicted Functional Partners:
mdtC
Multidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.773
cvaA
Colicin V secretion protein CvaA.
       0.773
APZ94052.1
Hypothetical protein.
  
     0.720
APZ94053.1
Hypothetical protein.
  
     0.680
APZ95066.1
Hypothetical protein.
       0.615
APZ93803.1
Hypothetical protein.
  
     0.610
APZ91860.1
Deoxyribodipyrimidine photolyase.
  
     0.578
APZ96265.1
Hypothetical protein.
  
     0.577
APZ94598.1
Type III secretion apparatus protein, YscD/HrpQ family.
  
     0.531
APZ95829.1
Putative conserved protein, contains FHA domain.
  
     0.520
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.