STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ95748.1Type II secretion system protein G. (377 aa)    
Predicted Functional Partners:
APZ91450.1
Verruc_Plancto-restricted protein.
  
     0.626
APZ94690.1
Ethanolamine utilization protein.
  
     0.613
APZ92558.1
Putative uridylyltransferase.
  
     0.533
APZ90432.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.501
APZ90642.1
Type IV pilus biogenesis/stability protein.
  
     0.480
xylR_3
Xylose operon regulatory protein.
 
     0.463
APZ95749.1
PEP-CTERM protein sorting domain protein.
       0.451
hrdB_2
RNA polymerase principal sigma factor HrdB; Belongs to the sigma-70 factor family.
  
     0.447
epsD_2
Putative glycosyltransferase EpsD.
  
     0.434
aspC
Aspartate aminotransferase.
  
    0.431
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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