STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ95936.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
fmt_2
Methionyl-tRNA formyltransferase.
  
  
 0.803
fdtB
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.717
fdtA
TDP-4-oxo-6-deoxy-alpha-D-glucose-3, 4-oxoisomerase.
       0.706
epsH_2
Putative glycosyltransferase EpsH.
 
    0.593
APZ95931.1
O-antigen translocase.
       0.529
vatD
Streptogramin A acetyltransferase.
       0.513
APZ95938.1
Putative membrane protein.
  
    0.486
APZ95939.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
     0.483
APZ95929.1
Hypothetical protein.
       0.480
APZ95937.1
D-aspartate ligase.
       0.450
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.