STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001719615_02328Unannotated protein. (380 aa)    
Predicted Functional Partners:
GCA_001719615_02329
Unannotated protein.
 
 0.999
GCA_001719615_00664
Unannotated protein.
 
  
 0.951
GCA_001719615_02654
Unannotated protein.
 
 0.941
GCA_001719615_00093
Unannotated protein.
    
 0.917
GCA_001719615_02327
Unannotated protein.
 
  
 0.909
GCA_001719615_01453
Unannotated protein.
   
 
 0.817
GCA_001719615_02261
Unannotated protein.
   
 0.788
GCA_001719615_02718
Unannotated protein.
    
 0.761
GCA_001719615_03187
Unannotated protein.
   
 0.760
GCA_001719615_02242
Unannotated protein.
   
 
 0.734
Your Current Organism:
Neptunicoccus sediminis
NCBI taxonomy Id: 1892596
Other names: CCTCC AB 2015430, CCTCC:AB:2015430, KCTC 42985, MCCC 1K03518, N. sediminis, NBRC 111872, Rhodobacteraceae bacterium CY02, strain CY02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.