STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001719615_02908Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_001719615_02906
Unannotated protein.
 
     0.856
GCA_001719615_02905
Unannotated protein.
 
     0.821
GCA_001719615_02907
Unannotated protein.
 
     0.803
GCA_001719615_02992
Unannotated protein.
  
    0.517
GCA_001719615_02903
Unannotated protein.
       0.470
GCA_001719615_02904
Unannotated protein.
       0.470
GCA_001719615_02902
Unannotated protein.
 
     0.438
GCA_001719615_02710
Unannotated protein.
  
 
  0.417
GCA_001719615_01902
Unannotated protein.
  
     0.406
Your Current Organism:
Neptunicoccus sediminis
NCBI taxonomy Id: 1892596
Other names: CCTCC AB 2015430, CCTCC:AB:2015430, KCTC 42985, MCCC 1K03518, N. sediminis, NBRC 111872, Rhodobacteraceae bacterium CY02, strain CY02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.