STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001719615_03429Unannotated protein. (182 aa)    
Predicted Functional Partners:
GCA_001719615_03427
Unannotated protein.
 
     0.887
GCA_001719615_03428
Unannotated protein.
 
     0.859
GCA_001719615_03431
Unannotated protein.
 
     0.848
GCA_001719615_03426
Unannotated protein.
 
     0.828
GCA_001719615_03430
Unannotated protein.
 
     0.827
GCA_001719615_00093
Unannotated protein.
   
 
  0.726
GCA_001719615_03174
Unannotated protein.
    
  0.548
GCA_001719615_03433
Unannotated protein.
       0.514
GCA_001719615_03432
Unannotated protein.
  
    0.498
GCA_001719615_03225
Unannotated protein.
  
  
  0.454
Your Current Organism:
Neptunicoccus sediminis
NCBI taxonomy Id: 1892596
Other names: CCTCC AB 2015430, CCTCC:AB:2015430, KCTC 42985, MCCC 1K03518, N. sediminis, NBRC 111872, Rhodobacteraceae bacterium CY02, strain CY02
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.