STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900117415_01121Unannotated protein. (829 aa)    
Predicted Functional Partners:
GCA_900117415_01119
Unannotated protein.
 
 
 0.907
GCA_900117415_01122
Unannotated protein.
 
    0.845
GCA_900117415_01123
Unannotated protein.
 
  
 0.825
GCA_900117415_01120
Unannotated protein.
       0.773
GCA_900117415_01125
Unannotated protein.
 
   
 0.768
GCA_900117415_01126
Unannotated protein.
 
    0.754
GCA_900117415_01124
Unannotated protein.
 
    
0.732
GCA_900117415_00190
Unannotated protein.
 
 
 0.714
GCA_900117415_04119
Unannotated protein.
 
 
 0.708
GCA_900117415_01114
Unannotated protein.
 
 
 0.693
Your Current Organism:
Hyphomicrobium sp. CS1BSMeth3
NCBI taxonomy Id: 1892844
Other names: H. sp. CS1BSMeth3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.