STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE25603.1Abc transporter. (274 aa)    
Predicted Functional Partners:
SHE25605.1
Hypothetical protein.
 
 0.991
SHE25604.1
Abc transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.989
SHE25606.1
Hypothetical protein.
 
 
 0.978
SHE25013.1
Abc transporter.
 
 
0.959
SHE25496.1
Hypothetical protein.
 
 0.942
SHE26068.1
Hypothetical protein.
 
 0.941
SHE24153.1
Hypothetical protein.
 
 0.938
SHE25012.1
Hypothetical protein.
 
 0.932
SHE25495.1
Hypothetical protein.
 
 0.928
SHE26067.1
Hypothetical protein.
 
 0.922
Your Current Organism:
Actinomyces glycerinitolerans
NCBI taxonomy Id: 1892869
Other names: A. glycerinitolerans, DSM 10377, TISTR 2318, strain G10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.