STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE25624.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
SHE26575.1
Hypothetical protein.
  
  
  0.930
dnaE2
Dna polymerase helix-hairpin-helix motif; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
   
 0.835
SHE26480.1
Dna polymerase helix-hairpin-helix motif.
   
 0.835
priA
Hypothetical protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
    
 
 0.821
SHE24682.1
Hypothetical protein.
  
 
  0.813
SHE26767.1
Dna polymerase iii delta subunit.
    
 
 0.811
SHE24919.1
Dna polymerase iii delta subunit.
    
 
 0.808
rnhA
Rnase h; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
 
 0.801
rpsF
Ribosomal protein s6 signature; Binds together with S18 to 16S ribosomal RNA.
  
  
 0.766
rplU
Ribosomal protein l21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
    0.741
Your Current Organism:
Actinomyces glycerinitolerans
NCBI taxonomy Id: 1892869
Other names: A. glycerinitolerans, DSM 10377, TISTR 2318, strain G10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.