Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE25185.1 | SHE25692.1 | ACGLYG10_1400 | ACGLYG10_1922 | Transcription regulator luxr c-terminal. | Peptidase s1 pa clan. | 0.465 |
SHE25678.1 | SHE25692.1 | ACGLYG10_1908 | ACGLYG10_1922 | Peptidase s1c. | Peptidase s1 pa clan. | 0.531 |
SHE25691.1 | SHE25692.1 | ACGLYG10_1921 | ACGLYG10_1922 | Hypothetical protein. | Peptidase s1 pa clan. | 0.628 |
SHE25692.1 | SHE25185.1 | ACGLYG10_1922 | ACGLYG10_1400 | Peptidase s1 pa clan. | Transcription regulator luxr c-terminal. | 0.465 |
SHE25692.1 | SHE25678.1 | ACGLYG10_1922 | ACGLYG10_1908 | Peptidase s1 pa clan. | Peptidase s1c. | 0.531 |
SHE25692.1 | SHE25691.1 | ACGLYG10_1922 | ACGLYG10_1921 | Peptidase s1 pa clan. | Hypothetical protein. | 0.628 |
SHE25692.1 | SHE26315.1 | ACGLYG10_1922 | ACGLYG10_2565 | Peptidase s1 pa clan. | Hypothetical protein. | 0.435 |
SHE26315.1 | SHE25692.1 | ACGLYG10_2565 | ACGLYG10_1922 | Hypothetical protein. | Peptidase s1 pa clan. | 0.435 |