STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE25820.1Alkyl hydroperoxide reductase subunit c/ thiol specific antioxidant. (252 aa)    
Predicted Functional Partners:
SHE25823.1
Cytochrome c biogenesis protein transmembrane region.
 
  
 0.926
SHE25821.1
Cytochrome c assembly protein.
 
  
 0.889
SHE25822.1
Hypothetical protein.
 
  
 0.868
SHE25824.1
Hypothetical protein.
 
     0.854
SHE25826.1
Multihaem cytochrome.
 
     0.834
SHE25825.1
Cytochrome c-552/4.
 
     0.830
trpC
Tryptophan synthase beta chain pyridoxal-phosphate attachment site; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.; Belongs to the TrpC family.
  
 
  0.746
trpB
Tryptophan synthase beta chain pyridoxal-phosphate attachment site; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 
  0.746
trpA
Tryptophan synthase alpha chain active site; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
  
 
  0.549
SHE25309.1
Transketolase signature 2; Belongs to the transketolase family.
    
  0.542
Your Current Organism:
Actinomyces glycerinitolerans
NCBI taxonomy Id: 1892869
Other names: A. glycerinitolerans, DSM 10377, TISTR 2318, strain G10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.