STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE25919.1Fes cluster biogenesis; Belongs to the HesB/IscA family. (131 aa)    
Predicted Functional Partners:
SHE23812.1
Aminotransferases class-v pyridoxal-phosphate attachment site.
 
 
 0.865
SHE25953.1
Hypothetical protein.
  
  
 0.834
prfA
Peptide chain release factor class i/class ii; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.783
SHE26804.1
Hypothetical protein.
  
 
 0.767
SHE25437.1
Hypothetical protein; Belongs to the GcvT family.
 
 
 0.751
SHE25951.1
Abc transporter.
  
 
 0.702
SHE25949.1
Suf system fes cluster assembly sufbd.
  
 
 0.627
SHE25950.1
Suf system fes cluster assembly sufbd.
  
 
 0.627
SHE25952.1
Aminotransferases class-v pyridoxal-phosphate attachment site; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.604
SHE26797.1
Uroporphyrinogen decarboxylase (uro-d); Belongs to the uroporphyrinogen decarboxylase family.
  
   
 0.594
Your Current Organism:
Actinomyces glycerinitolerans
NCBI taxonomy Id: 1892869
Other names: A. glycerinitolerans, DSM 10377, TISTR 2318, strain G10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.