STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE25973.1Aldolase-type tim barrel. (409 aa)    
Predicted Functional Partners:
SHE23826.1
Hypothetical protein.
 
 0.929
SHE23814.1
Phosphotransferase system sugar-specific permease eiia type 1.
  
 
 0.866
SHE25368.1
Phosphotransferase system eiib cysteine phosphorylation site.
  
 
 0.866
SHE25916.1
Phosphotransferase system sugar-specific permease eiia type 1.
  
 
 0.866
SHE26153.1
Phosphotransferase system sugar-specific permease eiia type 1.
  
 
 0.866
SHE24749.1
Alpha-galactosidase signature.
  
 
  0.846
SHE24832.1
4-alpha-glucanotransferase.
  
 
 0.839
SHE25969.1
Glycosyl hydrolase all-beta.
    
  0.824
SHE23867.1
Hypothetical protein.
   
 
 
0.822
SHE25947.1
Hypothetical protein.
  
 
  0.822
Your Current Organism:
Actinomyces glycerinitolerans
NCBI taxonomy Id: 1892869
Other names: A. glycerinitolerans, DSM 10377, TISTR 2318, strain G10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.