Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFX00417.1 | SFX00442.1 | SAMN02787144_1001115 | SAMN02787144_1001116 | Metal-sulfur cluster biosynthetic enzyme. | Nitrogen fixation protein NifU. | 0.997 |
SFX00417.1 | SFX00512.1 | SAMN02787144_1001115 | SAMN02787144_1001119 | Metal-sulfur cluster biosynthetic enzyme. | Rieske [2Fe-2S] domain-containing protein. | 0.849 |
SFX00417.1 | SFX00558.1 | SAMN02787144_1001115 | SAMN02787144_1001121 | Metal-sulfur cluster biosynthetic enzyme. | Iron-regulated ABC transporter membrane component SufB. | 0.957 |
SFX00417.1 | SFX00583.1 | SAMN02787144_1001115 | SAMN02787144_1001122 | Metal-sulfur cluster biosynthetic enzyme. | Predicted transcriptional regulator, ArsR family. | 0.783 |
SFX00417.1 | SFX00606.1 | SAMN02787144_1001115 | SAMN02787144_1001123 | Metal-sulfur cluster biosynthetic enzyme. | ABC-2 type transport system ATP-binding protein. | 0.722 |
SFX00417.1 | SFX00633.1 | SAMN02787144_1001115 | SAMN02787144_1001124 | Metal-sulfur cluster biosynthetic enzyme. | ABC-2 type transport system permease protein. | 0.722 |
SFX00417.1 | SFX00654.1 | SAMN02787144_1001115 | SAMN02787144_1001125 | Metal-sulfur cluster biosynthetic enzyme. | Cytochrome c oxidase assembly protein subunit 15. | 0.681 |
SFX00442.1 | SFX00417.1 | SAMN02787144_1001116 | SAMN02787144_1001115 | Nitrogen fixation protein NifU. | Metal-sulfur cluster biosynthetic enzyme. | 0.997 |
SFX00442.1 | SFX00512.1 | SAMN02787144_1001116 | SAMN02787144_1001119 | Nitrogen fixation protein NifU. | Rieske [2Fe-2S] domain-containing protein. | 0.863 |
SFX00442.1 | SFX00558.1 | SAMN02787144_1001116 | SAMN02787144_1001121 | Nitrogen fixation protein NifU. | Iron-regulated ABC transporter membrane component SufB. | 0.992 |
SFX00442.1 | SFX00583.1 | SAMN02787144_1001116 | SAMN02787144_1001122 | Nitrogen fixation protein NifU. | Predicted transcriptional regulator, ArsR family. | 0.851 |
SFX00442.1 | SFX00606.1 | SAMN02787144_1001116 | SAMN02787144_1001123 | Nitrogen fixation protein NifU. | ABC-2 type transport system ATP-binding protein. | 0.722 |
SFX00442.1 | SFX00633.1 | SAMN02787144_1001116 | SAMN02787144_1001124 | Nitrogen fixation protein NifU. | ABC-2 type transport system permease protein. | 0.722 |
SFX00442.1 | SFX00654.1 | SAMN02787144_1001116 | SAMN02787144_1001125 | Nitrogen fixation protein NifU. | Cytochrome c oxidase assembly protein subunit 15. | 0.681 |
SFX00512.1 | SFX00417.1 | SAMN02787144_1001119 | SAMN02787144_1001115 | Rieske [2Fe-2S] domain-containing protein. | Metal-sulfur cluster biosynthetic enzyme. | 0.849 |
SFX00512.1 | SFX00442.1 | SAMN02787144_1001119 | SAMN02787144_1001116 | Rieske [2Fe-2S] domain-containing protein. | Nitrogen fixation protein NifU. | 0.863 |
SFX00512.1 | SFX00558.1 | SAMN02787144_1001119 | SAMN02787144_1001121 | Rieske [2Fe-2S] domain-containing protein. | Iron-regulated ABC transporter membrane component SufB. | 0.839 |
SFX00512.1 | SFX00583.1 | SAMN02787144_1001119 | SAMN02787144_1001122 | Rieske [2Fe-2S] domain-containing protein. | Predicted transcriptional regulator, ArsR family. | 0.806 |
SFX00512.1 | SFX00606.1 | SAMN02787144_1001119 | SAMN02787144_1001123 | Rieske [2Fe-2S] domain-containing protein. | ABC-2 type transport system ATP-binding protein. | 0.605 |
SFX00512.1 | SFX00633.1 | SAMN02787144_1001119 | SAMN02787144_1001124 | Rieske [2Fe-2S] domain-containing protein. | ABC-2 type transport system permease protein. | 0.605 |
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