STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFX09934.1Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (424 aa)    
Predicted Functional Partners:
SFX09910.1
Iron uptake system component EfeO.
 
  
 0.980
SFX09959.1
High-affinity iron transporter.
 
  
 0.965
SFY38324.1
Hypothetical protein.
  
    0.726
SFX09983.1
Hypothetical protein.
       0.720
SFY38319.1
Copper transport protein.
  
  
 0.680
SFX14887.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
 
  0.582
SFY38309.1
Prephenate dehydratase.
     
 0.504
SFY12173.1
Protein of unknown function.
  
    0.465
Your Current Organism:
Streptomyces atratus
NCBI taxonomy Id: 1893
Other names: ATCC 14046, DSM 41673, IFO 3897, JCM 3386, NBRC 3897, NRRL B-16927, S. atratus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.