STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFX17704.1Putative ABC transport system ATP-binding protein. (295 aa)    
Predicted Functional Partners:
SFX72454.1
Putative ABC transport system permease protein.
 
 0.993
SFY39799.1
Putative ABC transport system permease protein.
 
 0.991
SFX17682.1
Putative ABC transport system permease protein.
 
 
 0.912
SFY29334.1
Putative ABC transport system permease protein.
 
  0.912
SFX17656.1
HD domain-containing protein.
       0.800
SFY29958.1
Putative ABC transport system permease protein.
  0.781
SFX78550.1
Putative ABC transport system permease protein.
  0.780
SFX96764.1
Putative ABC transport system permease protein.
 
  0.752
SFY39097.1
Putative ABC transport system permease protein.
 
 
 0.732
SFX86920.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.709
Your Current Organism:
Streptomyces atratus
NCBI taxonomy Id: 1893
Other names: ATCC 14046, DSM 41673, IFO 3897, JCM 3386, NBRC 3897, NRRL B-16927, S. atratus
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