Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFX01359.1 | SFX01380.1 | SAMN02787144_1001154 | SAMN02787144_1001155 | Tellurite resistance protein TerC. | Stress response protein SCP2. | 0.754 |
SFX01359.1 | SFX58635.1 | SAMN02787144_1001154 | SAMN02787144_1004180 | Tellurite resistance protein TerC. | Ca2+:H+ antiporter. | 0.557 |
SFX01359.1 | aroQ | SAMN02787144_1001154 | SAMN02787144_1003370 | Tellurite resistance protein TerC. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.430 |
SFX01380.1 | SFX01359.1 | SAMN02787144_1001155 | SAMN02787144_1001154 | Stress response protein SCP2. | Tellurite resistance protein TerC. | 0.754 |
SFX01380.1 | SFX58635.1 | SAMN02787144_1001155 | SAMN02787144_1004180 | Stress response protein SCP2. | Ca2+:H+ antiporter. | 0.557 |
SFX10062.1 | SFX58635.1 | SAMN02787144_1001481 | SAMN02787144_1004180 | N-Dimethylarginine dimethylaminohydrolase. | Ca2+:H+ antiporter. | 0.451 |
SFX10062.1 | SFX97421.1 | SAMN02787144_1001481 | SAMN02787144_1008241 | N-Dimethylarginine dimethylaminohydrolase. | Membrane protein. | 0.435 |
SFX10062.1 | SFY12584.1 | SAMN02787144_1001481 | SAMN02787144_1011126 | N-Dimethylarginine dimethylaminohydrolase. | Membrane protein. | 0.516 |
SFX58562.1 | SFX58590.1 | SAMN02787144_1004177 | SAMN02787144_1004178 | CubicO group peptidase, beta-lactamase class C family. | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family. | 0.770 |
SFX58562.1 | SFX58611.1 | SAMN02787144_1004177 | SAMN02787144_1004179 | CubicO group peptidase, beta-lactamase class C family. | Long-chain acyl-CoA synthetase. | 0.770 |
SFX58562.1 | SFX58635.1 | SAMN02787144_1004177 | SAMN02787144_1004180 | CubicO group peptidase, beta-lactamase class C family. | Ca2+:H+ antiporter. | 0.615 |
SFX58590.1 | SFX58562.1 | SAMN02787144_1004178 | SAMN02787144_1004177 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family. | CubicO group peptidase, beta-lactamase class C family. | 0.770 |
SFX58590.1 | SFX58611.1 | SAMN02787144_1004178 | SAMN02787144_1004179 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family. | Long-chain acyl-CoA synthetase. | 0.911 |
SFX58590.1 | SFX58635.1 | SAMN02787144_1004178 | SAMN02787144_1004180 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family. | Ca2+:H+ antiporter. | 0.802 |
SFX58611.1 | SFX58562.1 | SAMN02787144_1004179 | SAMN02787144_1004177 | Long-chain acyl-CoA synthetase. | CubicO group peptidase, beta-lactamase class C family. | 0.770 |
SFX58611.1 | SFX58590.1 | SAMN02787144_1004179 | SAMN02787144_1004178 | Long-chain acyl-CoA synthetase. | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family. | 0.911 |
SFX58611.1 | SFX58635.1 | SAMN02787144_1004179 | SAMN02787144_1004180 | Long-chain acyl-CoA synthetase. | Ca2+:H+ antiporter. | 0.784 |
SFX58611.1 | SFY44999.1 | SAMN02787144_1004179 | SAMN02787144_10586 | Long-chain acyl-CoA synthetase. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.555 |
SFX58635.1 | SFX01359.1 | SAMN02787144_1004180 | SAMN02787144_1001154 | Ca2+:H+ antiporter. | Tellurite resistance protein TerC. | 0.557 |
SFX58635.1 | SFX01380.1 | SAMN02787144_1004180 | SAMN02787144_1001155 | Ca2+:H+ antiporter. | Stress response protein SCP2. | 0.557 |
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