STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFX58804.1Heme-degrading monooxygenase HmoA. (373 aa)    
Predicted Functional Partners:
SFX58949.1
Cyclase.
    
 0.951
SFX58825.1
Putative monooxygenase.
  
    0.793
SFX58925.1
Aromatase.
  
    0.782
SFX58901.1
Minimal PKS acyl carrier protein.
       0.781
SFX31130.1
Sortase family protein.
  
  
 0.708
SFX58779.1
Putative polyketide hydroxylase.
     
 0.690
SFX58852.1
Minimal PKS ketosynthase (KS/KS alpha); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.641
SFX58878.1
Minimal PKS chain-length factor (CLF/KS beta); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.612
SFX61233.1
2-polyprenyl-6-methoxyphenol hydroxylase.
     
 0.473
SFY44135.1
Phosphopantetheine attachment site.
  
 
 0.473
Your Current Organism:
Streptomyces atratus
NCBI taxonomy Id: 1893
Other names: ATCC 14046, DSM 41673, IFO 3897, JCM 3386, NBRC 3897, NRRL B-16927, S. atratus
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