STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFX56546.1Fructokinase. (310 aa)    
Predicted Functional Partners:
SFX56525.1
Levanbiose-producing levanase.
  
 
 0.981
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.923
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.920
SFY32708.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
  
 
 0.915
SFY39438.1
Mannose-6-phosphate isomerase, type 1.
    
 0.915
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
  
 
 0.913
SFX33317.1
Fructose-1,6-bisphosphatase II.
    
 0.910
SFY44003.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.909
SFX09019.1
Alpha-glucosidase.
 
  
  0.810
SFY35920.1
Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.809
Your Current Organism:
Streptomyces atratus
NCBI taxonomy Id: 1893
Other names: ATCC 14046, DSM 41673, IFO 3897, JCM 3386, NBRC 3897, NRRL B-16927, S. atratus
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