STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFX65967.1Teichoic acid transport system permease protein. (309 aa)    
Predicted Functional Partners:
SFX65950.1
Teichoic acid transport system ATP-binding protein.
 
 0.999
SFY43524.1
Teichoic acid transport system ATP-binding protein.
 
 0.997
SFX65974.1
Glycosyltransferase, GT2 family.
 
  
 0.771
SFY43520.1
CDP-glycerol glycerophosphotransferase.
 
  
 0.732
SFY43521.1
CDP-glycerol glycerophosphotransferase.
 
  
 0.719
SFX96127.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.701
SFX66027.1
Glycerol-1-phosphate dehydrogenase [NAD(P)+].
 
     0.688
SFX66047.1
Choline kinase.
 
     0.687
SFX65990.1
CDP-alcohol phosphatidyltransferase.
 
     0.674
SFX16804.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.658
Your Current Organism:
Streptomyces atratus
NCBI taxonomy Id: 1893
Other names: ATCC 14046, DSM 41673, IFO 3897, JCM 3386, NBRC 3897, NRRL B-16927, S. atratus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.