STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFX67918.1Protein of unknown function. (216 aa)    
Predicted Functional Partners:
SFY23029.1
Hypothetical protein.
   
 0.984
SFY38712.1
Hypothetical protein.
    
 0.980
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
    
 0.972
SFY23160.1
Molecular chaperone HtpG.
    
 0.972
SFX67938.1
Uncharacterized conserved protein, DUF305 family.
 
     0.949
SFY44135.1
Phosphopantetheine attachment site.
   
 0.947
SFX94745.1
SNF2 family N-terminal domain-containing protein.
    
 0.908
SFX01623.1
Hypothetical protein.
    
 0.862
SFY11256.1
Uridine kinase.
    
 0.862
SFY44394.1
Uridine kinase.
    
 0.862
Your Current Organism:
Streptomyces atratus
NCBI taxonomy Id: 1893
Other names: ATCC 14046, DSM 41673, IFO 3897, JCM 3386, NBRC 3897, NRRL B-16927, S. atratus
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