Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFX38330.1 | SFX78441.1 | SAMN02787144_1002526 | SAMN02787144_1006138 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.583 |
SFX38330.1 | SFY40916.1 | SAMN02787144_1002526 | SAMN02787144_102621 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.737 |
SFX38330.1 | rpoB | SAMN02787144_1002526 | SAMN02787144_100747 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.917 |
SFX38330.1 | rpoC | SAMN02787144_1002526 | SAMN02787144_100746 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.913 |
SFX38330.1 | rpoZ | SAMN02787144_1002526 | SAMN02787144_1003387 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.834 |
SFX57396.1 | SFX78441.1 | SAMN02787144_1004127 | SAMN02787144_1006138 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.557 |
SFX78417.1 | SFX78441.1 | SAMN02787144_1006137 | SAMN02787144_1006138 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.842 |
SFX78417.1 | SFX78469.1 | SAMN02787144_1006137 | SAMN02787144_1006139 | Hypothetical protein. | CHAT domain-containing protein. | 0.459 |
SFX78417.1 | SFX78488.1 | SAMN02787144_1006137 | SAMN02787144_1006140 | Hypothetical protein. | Hypothetical protein. | 0.454 |
SFX78441.1 | SFX38330.1 | SAMN02787144_1006138 | SAMN02787144_1002526 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.583 |
SFX78441.1 | SFX57396.1 | SAMN02787144_1006138 | SAMN02787144_1004127 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.557 |
SFX78441.1 | SFX78417.1 | SAMN02787144_1006138 | SAMN02787144_1006137 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.842 |
SFX78441.1 | SFX78469.1 | SAMN02787144_1006138 | SAMN02787144_1006139 | RNA polymerase sigma-70 factor, ECF subfamily. | CHAT domain-containing protein. | 0.507 |
SFX78441.1 | SFX78488.1 | SAMN02787144_1006138 | SAMN02787144_1006140 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.454 |
SFX78441.1 | SFY40916.1 | SAMN02787144_1006138 | SAMN02787144_102621 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.447 |
SFX78441.1 | SFY42815.1 | SAMN02787144_1006138 | SAMN02787144_103220 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.599 |
SFX78441.1 | rpoB | SAMN02787144_1006138 | SAMN02787144_100747 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.524 |
SFX78441.1 | rpoC | SAMN02787144_1006138 | SAMN02787144_100746 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.546 |
SFX78441.1 | rpoZ | SAMN02787144_1006138 | SAMN02787144_1003387 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.442 |
SFX78469.1 | SFX78417.1 | SAMN02787144_1006139 | SAMN02787144_1006137 | CHAT domain-containing protein. | Hypothetical protein. | 0.459 |
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