Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFX25311.1 | SFY06324.1 | SAMN02787144_10021 | SAMN02787144_101066 | Glycosyl hydrolases family 18. | Hypothetical protein. | 0.653 |
SFX25311.1 | SFY43934.1 | SAMN02787144_10021 | SAMN02787144_10411 | Glycosyl hydrolases family 18. | Chitinase; Belongs to the glycosyl hydrolase 18 family. | 0.661 |
SFX27210.1 | SFY06324.1 | SAMN02787144_100271 | SAMN02787144_101066 | Protoporphyrin IX magnesium-chelatase. | Hypothetical protein. | 0.535 |
SFY06324.1 | SFX25311.1 | SAMN02787144_101066 | SAMN02787144_10021 | Hypothetical protein. | Glycosyl hydrolases family 18. | 0.653 |
SFY06324.1 | SFX27210.1 | SAMN02787144_101066 | SAMN02787144_100271 | Hypothetical protein. | Protoporphyrin IX magnesium-chelatase. | 0.535 |
SFY06324.1 | SFY06341.1 | SAMN02787144_101066 | SAMN02787144_101067 | Hypothetical protein. | Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-). | 0.856 |
SFY06324.1 | SFY06358.1 | SAMN02787144_101066 | SAMN02787144_101068 | Hypothetical protein. | Raffinose/stachyose/melibiose transport system permease protein. | 0.850 |
SFY06324.1 | SFY06373.1 | SAMN02787144_101066 | SAMN02787144_101069 | Hypothetical protein. | Raffinose/stachyose/melibiose transport system substrate-binding protein. | 0.942 |
SFY06324.1 | SFY06391.1 | SAMN02787144_101066 | SAMN02787144_101070 | Hypothetical protein. | alpha-L-rhamnosidase. | 0.901 |
SFY06324.1 | SFY33193.1 | SAMN02787144_101066 | SAMN02787144_1018118 | Hypothetical protein. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.868 |
SFY06324.1 | SFY43934.1 | SAMN02787144_101066 | SAMN02787144_10411 | Hypothetical protein. | Chitinase; Belongs to the glycosyl hydrolase 18 family. | 0.653 |
SFY06324.1 | guaA | SAMN02787144_101066 | SAMN02787144_1011182 | Hypothetical protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.641 |
SFY06324.1 | guaB | SAMN02787144_101066 | SAMN02787144_1011195 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.568 |
SFY06341.1 | SFY06324.1 | SAMN02787144_101067 | SAMN02787144_101066 | Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-). | Hypothetical protein. | 0.856 |
SFY06341.1 | SFY06358.1 | SAMN02787144_101067 | SAMN02787144_101068 | Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-). | Raffinose/stachyose/melibiose transport system permease protein. | 0.996 |
SFY06341.1 | SFY06373.1 | SAMN02787144_101067 | SAMN02787144_101069 | Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-). | Raffinose/stachyose/melibiose transport system substrate-binding protein. | 0.980 |
SFY06341.1 | SFY06391.1 | SAMN02787144_101067 | SAMN02787144_101070 | Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-). | alpha-L-rhamnosidase. | 0.821 |
SFY06358.1 | SFY06324.1 | SAMN02787144_101068 | SAMN02787144_101066 | Raffinose/stachyose/melibiose transport system permease protein. | Hypothetical protein. | 0.850 |
SFY06358.1 | SFY06341.1 | SAMN02787144_101068 | SAMN02787144_101067 | Raffinose/stachyose/melibiose transport system permease protein. | Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-). | 0.996 |
SFY06358.1 | SFY06373.1 | SAMN02787144_101068 | SAMN02787144_101069 | Raffinose/stachyose/melibiose transport system permease protein. | Raffinose/stachyose/melibiose transport system substrate-binding protein. | 0.982 |
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