STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFY38496.1Transcriptional regulator, TetR family. (252 aa)    
Predicted Functional Partners:
SFX70395.1
Transcriptional regulator, TetR family.
  
     0.756
SFY40602.1
Transcriptional regulator, TetR family.
  
     0.753
SFW98984.1
Transcriptional regulator, TetR family.
  
     0.699
SFX99928.1
Transcriptional regulator, TetR family.
  
     0.672
SFY38491.1
Drug resistance transporter, EmrB/QacA subfamily.
       0.570
SFY38465.1
Protein of unknown function.
       0.557
SFY38478.1
Two-component system, OmpR family, response regulator.
       0.557
SFY42211.1
GtrA-like protein.
       0.557
SFY18213.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.439
SFY42802.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
    0.400
Your Current Organism:
Streptomyces atratus
NCBI taxonomy Id: 1893
Other names: ATCC 14046, DSM 41673, IFO 3897, JCM 3386, NBRC 3897, NRRL B-16927, S. atratus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.