Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFX47357.1 | SFY40034.1 | SAMN02787144_1003246 | SAMN02787144_102482 | Glycine betaine/proline transport system substrate-binding protein. | Hypothetical protein. | 0.440 |
SFX93460.1 | SFY40034.1 | SAMN02787144_100816 | SAMN02787144_102482 | Uncharacterized membrane protein, DUF485 family. | Hypothetical protein. | 0.557 |
SFY40029.1 | SFY40034.1 | SAMN02787144_102481 | SAMN02787144_102482 | DNA topoisomerase IV subunit B. | Hypothetical protein. | 0.506 |
SFY40029.1 | SFY40038.1 | SAMN02787144_102481 | SAMN02787144_102483 | DNA topoisomerase IV subunit B. | Histidine kinase. | 0.468 |
SFY40029.1 | SFY40043.1 | SAMN02787144_102481 | SAMN02787144_102484 | DNA topoisomerase IV subunit B. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.468 |
SFY40034.1 | SFX47357.1 | SAMN02787144_102482 | SAMN02787144_1003246 | Hypothetical protein. | Glycine betaine/proline transport system substrate-binding protein. | 0.440 |
SFY40034.1 | SFX93460.1 | SAMN02787144_102482 | SAMN02787144_100816 | Hypothetical protein. | Uncharacterized membrane protein, DUF485 family. | 0.557 |
SFY40034.1 | SFY40029.1 | SAMN02787144_102482 | SAMN02787144_102481 | Hypothetical protein. | DNA topoisomerase IV subunit B. | 0.506 |
SFY40034.1 | SFY40038.1 | SAMN02787144_102482 | SAMN02787144_102483 | Hypothetical protein. | Histidine kinase. | 0.807 |
SFY40034.1 | SFY40043.1 | SAMN02787144_102482 | SAMN02787144_102484 | Hypothetical protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.807 |
SFY40038.1 | SFY40029.1 | SAMN02787144_102483 | SAMN02787144_102481 | Histidine kinase. | DNA topoisomerase IV subunit B. | 0.468 |
SFY40038.1 | SFY40034.1 | SAMN02787144_102483 | SAMN02787144_102482 | Histidine kinase. | Hypothetical protein. | 0.807 |
SFY40038.1 | SFY40043.1 | SAMN02787144_102483 | SAMN02787144_102484 | Histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.815 |
SFY40043.1 | SFY40029.1 | SAMN02787144_102484 | SAMN02787144_102481 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | DNA topoisomerase IV subunit B. | 0.468 |
SFY40043.1 | SFY40034.1 | SAMN02787144_102484 | SAMN02787144_102482 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Hypothetical protein. | 0.807 |
SFY40043.1 | SFY40038.1 | SAMN02787144_102484 | SAMN02787144_102483 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Histidine kinase. | 0.815 |