STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFY42777.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-). (418 aa)    
Predicted Functional Partners:
SFX28581.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
 0.973
SFX28601.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 0.971
SFX38140.1
Binding-protein-dependent transport system inner membrane component.
 
 0.957
SFY36050.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.919
SFX97050.1
Multiple sugar transport system permease protein.
 
 0.911
SFX09046.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
 0.896
SFY06358.1
Raffinose/stachyose/melibiose transport system permease protein.
 
 0.889
SFX95926.1
N-acetylglucosamine transport system permease protein.
 
 0.883
SFY43208.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
 0.882
SFX17975.1
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 0.867
Your Current Organism:
Streptomyces atratus
NCBI taxonomy Id: 1893
Other names: ATCC 14046, DSM 41673, IFO 3897, JCM 3386, NBRC 3897, NRRL B-16927, S. atratus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.