Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFY39148.1 | SFY39193.1 | SAMN02787144_102333 | SAMN02787144_102340 | Hypothetical protein. | Transcriptional regulator, RpiR family. | 0.557 |
SFY39148.1 | SFY44857.1 | SAMN02787144_102333 | SAMN02787144_105417 | Hypothetical protein. | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | 0.557 |
SFY39193.1 | SFY39148.1 | SAMN02787144_102340 | SAMN02787144_102333 | Transcriptional regulator, RpiR family. | Hypothetical protein. | 0.557 |
SFY39193.1 | SFY44857.1 | SAMN02787144_102340 | SAMN02787144_105417 | Transcriptional regulator, RpiR family. | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | 0.497 |
SFY43807.1 | SFY44857.1 | SAMN02787144_103931 | SAMN02787144_105417 | Esterase FrsA; Belongs to the UPF0255 family. | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | 0.457 |
SFY44852.1 | SFY44854.1 | SAMN02787144_105414 | SAMN02787144_105415 | Choline dehydrogenase. | Hypothetical protein. | 0.774 |
SFY44852.1 | SFY44856.1 | SAMN02787144_105414 | SAMN02787144_105416 | Choline dehydrogenase. | Aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.716 |
SFY44852.1 | SFY44857.1 | SAMN02787144_105414 | SAMN02787144_105417 | Choline dehydrogenase. | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | 0.751 |
SFY44852.1 | SFY44859.1 | SAMN02787144_105414 | SAMN02787144_105418 | Choline dehydrogenase. | Agmatinase; Belongs to the arginase family. | 0.475 |
SFY44854.1 | SFY44852.1 | SAMN02787144_105415 | SAMN02787144_105414 | Hypothetical protein. | Choline dehydrogenase. | 0.774 |
SFY44854.1 | SFY44856.1 | SAMN02787144_105415 | SAMN02787144_105416 | Hypothetical protein. | Aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.693 |
SFY44854.1 | SFY44857.1 | SAMN02787144_105415 | SAMN02787144_105417 | Hypothetical protein. | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | 0.693 |
SFY44854.1 | SFY44859.1 | SAMN02787144_105415 | SAMN02787144_105418 | Hypothetical protein. | Agmatinase; Belongs to the arginase family. | 0.480 |
SFY44856.1 | SFY44852.1 | SAMN02787144_105416 | SAMN02787144_105414 | Aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Choline dehydrogenase. | 0.716 |
SFY44856.1 | SFY44854.1 | SAMN02787144_105416 | SAMN02787144_105415 | Aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.693 |
SFY44856.1 | SFY44857.1 | SAMN02787144_105416 | SAMN02787144_105417 | Aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | 0.773 |
SFY44856.1 | SFY44859.1 | SAMN02787144_105416 | SAMN02787144_105418 | Aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Agmatinase; Belongs to the arginase family. | 0.716 |
SFY44857.1 | SFY39148.1 | SAMN02787144_105417 | SAMN02787144_102333 | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | Hypothetical protein. | 0.557 |
SFY44857.1 | SFY39193.1 | SAMN02787144_105417 | SAMN02787144_102340 | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | Transcriptional regulator, RpiR family. | 0.497 |
SFY44857.1 | SFY43807.1 | SAMN02787144_105417 | SAMN02787144_103931 | Nucleobase:cation symporter-1, NCS1 family; Belongs to the purine-cytosine permease (2.A.39) family. | Esterase FrsA; Belongs to the UPF0255 family. | 0.457 |
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