STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF331_09390Unannotated protein. (293 aa)    
Predicted Functional Partners:
AF331_09380
Unannotated protein.
 
 0.999
AF331_09385
Unannotated protein.
 
 0.999
AF331_16695
Unannotated protein.
 
 0.937
purN
Unannotated protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.859
purM
Unannotated protein.
   
    0.743
AF331_09375
Unannotated protein; Belongs to the GbsR family.
 
   
 0.728
potA
Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
    
 0.636
AF331_14610
Unannotated protein; Belongs to the ABC transporter superfamily.
    
 0.636
AF331_13605
Unannotated protein; Belongs to the ABC transporter superfamily.
    
 0.636
AF331_15635
Unannotated protein; Belongs to the ABC transporter superfamily.
    
 0.636
Your Current Organism:
Bacillus marisflavi
NCBI taxonomy Id: 189381
Other names: B. marisflavi, Bacillus marisflavi Yoon et al. 2003, Bacillus sp. JP44SK15, Bacillus sp. JP44SK40, Bacillus sp. LK16, Bacillus sp. LK19, Bacillus sp. LK26, JCM 11544, KCCM 41588, strain TF-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.