STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF331_10965Unannotated protein. (398 aa)    
Predicted Functional Partners:
AF331_10960
Unannotated protein.
 
     0.870
AF331_14680
Unannotated protein.
   
  0.623
AF331_05750
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.578
AF331_10955
Unannotated protein.
       0.478
AF331_11075
Unannotated protein.
  
     0.476
AF331_08870
Unannotated protein.
  
     0.454
AF331_12755
Unannotated protein.
  
     0.449
AF331_16585
Unannotated protein.
  
     0.433
AF331_15660
Unannotated protein.
 
 
 
 0.425
AF331_08875
Unannotated protein.
  
    0.412
Your Current Organism:
Bacillus marisflavi
NCBI taxonomy Id: 189381
Other names: B. marisflavi, Bacillus marisflavi Yoon et al. 2003, Bacillus sp. JP44SK15, Bacillus sp. JP44SK40, Bacillus sp. LK16, Bacillus sp. LK19, Bacillus sp. LK26, JCM 11544, KCCM 41588, strain TF-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.