STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF331_10895Unannotated protein. (181 aa)    
Predicted Functional Partners:
AF331_10890
Unannotated protein.
 
     0.795
AF331_16925
Unannotated protein.
  
     0.735
AF331_10880
Unannotated protein.
 
     0.683
AF331_10885
Unannotated protein.
 
     0.636
AF331_16585
Unannotated protein.
 
     0.633
AF331_13450
Unannotated protein.
  
     0.584
AF331_14090
Unannotated protein.
  
     0.575
AF331_14065
Unannotated protein.
  
     0.514
AF331_20425
Unannotated protein.
  
     0.457
AF331_00240
Unannotated protein; Belongs to the Cob(I)alamin adenosyltransferase family.
  
     0.444
Your Current Organism:
Bacillus marisflavi
NCBI taxonomy Id: 189381
Other names: B. marisflavi, Bacillus marisflavi Yoon et al. 2003, Bacillus sp. JP44SK15, Bacillus sp. JP44SK40, Bacillus sp. LK16, Bacillus sp. LK19, Bacillus sp. LK26, JCM 11544, KCCM 41588, strain TF-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.