STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF331_16410Unannotated protein. (229 aa)    
Predicted Functional Partners:
AF331_16295
Unannotated protein.
 
  0.921
AF331_15520
Unannotated protein.
 
  0.914
AF331_16405
Unannotated protein.
    
  0.657
GCA_900166615_01961
Unannotated protein.
   
 0.580
AF331_16415
Unannotated protein.
       0.547
AF331_06095
Unannotated protein.
 
 
  0.498
AF331_03870
Unannotated protein.
 
 
  0.484
GCA_900166615_00468
Unannotated protein.
 
 0.437
AF331_16400
Unannotated protein.
       0.423
AF331_16300
Unannotated protein.
  
 
  0.409
Your Current Organism:
Bacillus marisflavi
NCBI taxonomy Id: 189381
Other names: B. marisflavi, Bacillus marisflavi Yoon et al. 2003, Bacillus sp. JP44SK15, Bacillus sp. JP44SK40, Bacillus sp. LK16, Bacillus sp. LK19, Bacillus sp. LK26, JCM 11544, KCCM 41588, strain TF-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.