STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF331_17130Unannotated protein. (361 aa)    
Predicted Functional Partners:
AF331_17125
Unannotated protein.
 
  
 0.955
AF331_17135
Unannotated protein.
 
  
 0.931
AF331_04290
Unannotated protein.
 
  
 0.782
AF331_19180
Unannotated protein.
  
     0.708
AF331_04300
Unannotated protein.
 
  
 0.626
AF331_17120
Unannotated protein.
       0.594
GCA_900166615_00543
Unannotated protein.
  
     0.590
AF331_13490
Unannotated protein.
  
     0.554
AF331_17160
Unannotated protein.
 
     0.549
AF331_18355
Unannotated protein.
  
     0.518
Your Current Organism:
Bacillus marisflavi
NCBI taxonomy Id: 189381
Other names: B. marisflavi, Bacillus marisflavi Yoon et al. 2003, Bacillus sp. JP44SK15, Bacillus sp. JP44SK40, Bacillus sp. LK16, Bacillus sp. LK19, Bacillus sp. LK26, JCM 11544, KCCM 41588, strain TF-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.