STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAUnannotated protein; Belongs to the glutaminase family. (307 aa)    
Predicted Functional Partners:
AF331_10315
Unannotated protein.
     
 0.937
proB
Unannotated protein; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
     
  0.807
AF331_16655
Unannotated protein; Belongs to the group II decarboxylase family.
 
 
 0.792
AF331_05925
Unannotated protein.
    
 0.711
AF331_20095
Unannotated protein.
  
 
 0.708
murI
Unannotated protein; Provides the (R)-glutamate required for cell wall biosynthesis.
     
 0.701
AF331_10100
Unannotated protein.
  
  
  0.698
AF331_19075
Unannotated protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
  
  
 0.672
gcvT
Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine.
    
  0.669
AF331_03135
Unannotated protein.
    
 0.667
Your Current Organism:
Bacillus marisflavi
NCBI taxonomy Id: 189381
Other names: B. marisflavi, Bacillus marisflavi Yoon et al. 2003, Bacillus sp. JP44SK15, Bacillus sp. JP44SK40, Bacillus sp. LK16, Bacillus sp. LK19, Bacillus sp. LK26, JCM 11544, KCCM 41588, strain TF-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.