Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AF331_03315 | AF331_03320 | GCA_900166615_03641 | GCA_900166615_03640 | Unannotated protein. | Unannotated protein. | 0.999 |
AF331_03315 | AF331_03325 | GCA_900166615_03641 | GCA_900166615_03639 | Unannotated protein. | Unannotated protein; Component of the menaquinol-cytochrome c reductase complex. | 0.999 |
AF331_03315 | AF331_03510 | GCA_900166615_03641 | GCA_900166615_03599 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.905 |
AF331_03315 | AF331_03515 | GCA_900166615_03641 | GCA_900166615_03598 | Unannotated protein. | Unannotated protein. | 0.887 |
AF331_03315 | AF331_07175 | GCA_900166615_03641 | GCA_900166615_02840 | Unannotated protein. | Unannotated protein. | 0.958 |
AF331_03315 | AF331_07185 | GCA_900166615_03641 | GCA_900166615_02838 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
AF331_03315 | AF331_15905 | GCA_900166615_03641 | GCA_900166615_02038 | Unannotated protein. | Unannotated protein. | 0.987 |
AF331_03315 | ctaD | GCA_900166615_03641 | GCA_900166615_02839 | Unannotated protein. | Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.900 |
AF331_03315 | qoxC | GCA_900166615_03641 | GCA_900166615_02062 | Unannotated protein. | Unannotated protein. | 0.945 |
AF331_03320 | AF331_03315 | GCA_900166615_03640 | GCA_900166615_03641 | Unannotated protein. | Unannotated protein. | 0.999 |
AF331_03320 | AF331_03325 | GCA_900166615_03640 | GCA_900166615_03639 | Unannotated protein. | Unannotated protein; Component of the menaquinol-cytochrome c reductase complex. | 0.999 |
AF331_03320 | AF331_03510 | GCA_900166615_03640 | GCA_900166615_03599 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.966 |
AF331_03320 | AF331_03515 | GCA_900166615_03640 | GCA_900166615_03598 | Unannotated protein. | Unannotated protein. | 0.965 |
AF331_03320 | AF331_07175 | GCA_900166615_03640 | GCA_900166615_02840 | Unannotated protein. | Unannotated protein. | 0.982 |
AF331_03320 | AF331_07185 | GCA_900166615_03640 | GCA_900166615_02838 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
AF331_03320 | AF331_15905 | GCA_900166615_03640 | GCA_900166615_02038 | Unannotated protein. | Unannotated protein. | 0.981 |
AF331_03320 | AF331_19835 | GCA_900166615_03640 | GCA_900166615_00250 | Unannotated protein. | Unannotated protein. | 0.981 |
AF331_03320 | ctaD | GCA_900166615_03640 | GCA_900166615_02839 | Unannotated protein. | Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.973 |
AF331_03320 | qoxC | GCA_900166615_03640 | GCA_900166615_02062 | Unannotated protein. | Unannotated protein. | 0.970 |
AF331_03325 | AF331_03315 | GCA_900166615_03639 | GCA_900166615_03641 | Unannotated protein; Component of the menaquinol-cytochrome c reductase complex. | Unannotated protein. | 0.999 |
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