STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF331_03015Unannotated protein. (556 aa)    
Predicted Functional Partners:
ccsB
Unannotated protein.
 
  
 0.988
AF331_03010
Unannotated protein.
 
  
 0.910
AF331_01220
Unannotated protein.
 
  
 0.905
AF331_03325
Unannotated protein; Component of the menaquinol-cytochrome c reductase complex.
 
  
 0.863
AF331_15905
Unannotated protein.
 
  
 0.792
AF331_02295
Unannotated protein.
  
     0.769
AF331_03215
Unannotated protein.
  
     0.768
AF331_17440
Unannotated protein.
  
     0.767
AF331_08370
Unannotated protein.
  
    0.767
AF331_09945
Unannotated protein.
  
     0.766
Your Current Organism:
Bacillus marisflavi
NCBI taxonomy Id: 189381
Other names: B. marisflavi, Bacillus marisflavi Yoon et al. 2003, Bacillus sp. JP44SK15, Bacillus sp. JP44SK40, Bacillus sp. LK16, Bacillus sp. LK19, Bacillus sp. LK26, JCM 11544, KCCM 41588, strain TF-11
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.