Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AF331_00550 | AF331_03285 | GCA_900166615_04292 | GCA_900166615_03647 | Unannotated protein. | Unannotated protein. | 0.971 |
AF331_00550 | aroA | GCA_900166615_04292 | GCA_900166615_03646 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.997 |
AF331_00550 | aroB | GCA_900166615_04292 | GCA_900166615_03650 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.994 |
AF331_00550 | aroC | GCA_900166615_04292 | GCA_900166615_03651 | Unannotated protein. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.997 |
AF331_00550 | aroE | GCA_900166615_04292 | GCA_900166615_03948 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.957 |
AF331_00550 | aroK | GCA_900166615_04292 | GCA_900166615_03821 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.977 |
AF331_00550 | aroQ | GCA_900166615_04292 | GCA_900166615_03805 | Unannotated protein. | Unannotated protein; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.841 |
AF331_02385 | AF331_02390 | GCA_900166615_03826 | GCA_900166615_03825 | Unannotated protein; Required for transformation and DNA binding. | Unannotated protein. | 0.800 |
AF331_02385 | AF331_02400 | GCA_900166615_03826 | GCA_900166615_03823 | Unannotated protein; Required for transformation and DNA binding. | Unannotated protein. | 0.970 |
AF331_02385 | aroK | GCA_900166615_03826 | GCA_900166615_03821 | Unannotated protein; Required for transformation and DNA binding. | Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.800 |
AF331_02390 | AF331_02385 | GCA_900166615_03825 | GCA_900166615_03826 | Unannotated protein. | Unannotated protein; Required for transformation and DNA binding. | 0.800 |
AF331_02390 | AF331_02400 | GCA_900166615_03825 | GCA_900166615_03823 | Unannotated protein. | Unannotated protein. | 0.800 |
AF331_02390 | aroK | GCA_900166615_03825 | GCA_900166615_03821 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.800 |
AF331_02400 | AF331_02385 | GCA_900166615_03823 | GCA_900166615_03826 | Unannotated protein. | Unannotated protein; Required for transformation and DNA binding. | 0.970 |
AF331_02400 | AF331_02390 | GCA_900166615_03823 | GCA_900166615_03825 | Unannotated protein. | Unannotated protein. | 0.800 |
AF331_02400 | aroK | GCA_900166615_03823 | GCA_900166615_03821 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.800 |
AF331_03285 | AF331_00550 | GCA_900166615_03647 | GCA_900166615_04292 | Unannotated protein. | Unannotated protein. | 0.971 |
AF331_03285 | aroA | GCA_900166615_03647 | GCA_900166615_03646 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.999 |
AF331_03285 | aroB | GCA_900166615_03647 | GCA_900166615_03650 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.913 |
AF331_03285 | aroC | GCA_900166615_03647 | GCA_900166615_03651 | Unannotated protein. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.986 |
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