STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF331_01260Unannotated protein. (343 aa)    
Predicted Functional Partners:
AF331_01255
Unannotated protein.
 
  
 0.947
AF331_17385
Unannotated protein.
  
   
 0.815
AF331_03335
Unannotated protein.
  
     0.770
AF331_01340
Unannotated protein.
  
     0.765
AF331_17340
Unannotated protein.
  
     0.759
AF331_14030
Unannotated protein.
  
     0.755
AF331_21520
Unannotated protein.
  
     0.754
AF331_05880
Unannotated protein.
  
     0.749
AF331_01125
Unannotated protein.
  
    0.748
AF331_19265
Unannotated protein.
  
     0.746
Your Current Organism:
Bacillus marisflavi
NCBI taxonomy Id: 189381
Other names: B. marisflavi, Bacillus marisflavi Yoon et al. 2003, Bacillus sp. JP44SK15, Bacillus sp. JP44SK40, Bacillus sp. LK16, Bacillus sp. LK19, Bacillus sp. LK26, JCM 11544, KCCM 41588, strain TF-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.