STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIU72996.1Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)    
Predicted Functional Partners:
tatA
Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.808
OIU70556.1
5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.676
OIU70974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.647
OIU73233.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.643
OIU66396.1
Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.638
OIU70820.1
Protease modulator HflC; HflC and HflK could regulate a protease.
   
 0.636
hflK
HflK protein; HflC and HflK could encode or regulate a protease.
   
 0.636
cwlD
N-acetylmuramoyl-L-alanine amidase CwlD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.635
OIU72995.1
holo-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.604
Your Current Organism:
Bacillus aquimaris
NCBI taxonomy Id: 189382
Other names: B. aquimaris, Bacillus aquimaris Yoon et al. 2003, Bacillus sp. JP44SK28, JCM 11545, KCCM 41589, strain TF-12, strain TF12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.