STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIU72022.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)    
Predicted Functional Partners:
OIU72023.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OIU72616.1
Choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OIU71907.1
Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OIU72024.1
Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
OIU71908.1
Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
OIU67020.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.530
OIU71906.1
Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.485
OIU72025.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.421
Your Current Organism:
Bacillus aquimaris
NCBI taxonomy Id: 189382
Other names: B. aquimaris, Bacillus aquimaris Yoon et al. 2003, Bacillus sp. JP44SK28, JCM 11545, KCCM 41589, strain TF-12, strain TF12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.