STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIU71046.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
OIU71047.1
Major capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.989
OIU71049.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.918
OIU71044.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.906
OIU71043.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.903
OIU71045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.888
OIU71482.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
OIU71042.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.886
OIU71051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.874
OIU71052.1
Phage major tail protein, TP901-1 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.864
OIU71050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.686
Your Current Organism:
Bacillus aquimaris
NCBI taxonomy Id: 189382
Other names: B. aquimaris, Bacillus aquimaris Yoon et al. 2003, Bacillus sp. JP44SK28, JCM 11545, KCCM 41589, strain TF-12, strain TF12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.